A Guide to Structure Prediction 

Biocomputing For Everyone! An introduction to topics in biocomputingioinformatics

BioComputing Hypertext Coursebook About alignments, phylogeny etc

Circular Dichroism Spectroscopy Introduction and some theory

CMC Modelling Guide Coursematerial from Utrecht University in Holland in a course named "Drug Design and Computational Chemistry" Contains a lot about modelling structures and dynamics!

Crystallography 101 A course in X-ray crystallography

Phylogeny and Reconstructing Phylogenetic Trees by a java algorithm

Protein Sequence Alignment and Database Scanning A preprint of a chapter in Protein Structure prediction - a practical approachEdited by M. J. E. Sternberg, IRL Press at Oxford University Press, 1996, ISBN 0 19 963496 3 Written by Geoffrey J. Barton

Sequence analysis These hypertext documents are intended to summarize the basic workings and concepts behind some popular programs, as well as to point out necessary cautions